To my knowledge there isn't a place where all the links for Marathon scenarios are available. I'd love any and all help compiling that list of links. If one already exists please let me know.
EDIT: Okay I did some poking and here's what I have found
Acephalosity
Apotheosis
Durandal's Son
Killing Time
Sigma Blue
Excalibur: Morgana's Revenge
Marathon: Eternal
Marathon Phoenix
List of 55 Aleph One scenarios @ Traxus